Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787730.1_cds_XP_016511129.1_231
CDS Infomation

[gene=LOC107828331] [db_xref=GeneID:107828331] [protein=protein SET DOMAIN GROUP 40-like] [protein_id=XP_016511129.1] [location=join(6071..6204,6293..6443,7118..7249,7399..7539,7995..8261,8493..9203)] [gbkey=CDS]
Sequence

ATGGAAGAAGCATTGAACTTCCTGCAATGGGCAGCTGATTTAGGAATCTCAGACACTCCT
TTAACTTCAACCCCTCAATCAGATTCATGTTTGGGACACTCCCTCTTTGTCTCTACTTTC
CCTGATGCCGGAGGGAGAGGTTTAGCAACAGCTCGTGATATTAGGAAAGGGGAATTGATT
CTTAAAGTTCCAAACGGAGCGTTAATGACTAGTCAAAACCTTATGATTAACGATGAGGTG
CTGTCAATTTCTGTCAAGAAGCACCCTTATCTCTCCTCTACTCAGATATTGGTTGTTGCA
CTATTAAATGAAGTGAACAAGGGAAAGAGTTCTCCGTGGTGGCCCTATCTAAAACAGTTC
CCACGCAGCTATGACACACTTGCAGATTTTGACAAATTCGAGATACAAGCATTGCAAATT
GATGATGCCATCTGGGCTGCACAAAAGGCTTCTCTGAAGGCTGAAGCAGAGTGGAAAGAA
GCTAGTGTGCTTATGCATGACCTCAAGCTCAAACCACAGCTCCTGACTCTCAAGGCTTGG
CTGTGGGCCTCTGGTTCTATATCCTCGCGCACCATGCATATACCTTGGGATGAAGCTGGA
TGTTTATGCCCTGTTGGAGATTTCTTCAACTACGCAGCACCTGGAGATGAAACATCTAAT
TCTGAAGATCAGGTTGCTGGAAAAGCCTTTTATTTGCAAGAAGACAGTATGCTTAAATCA
GCAACTGAATTGGCCACAGACCATAGGCTAATAGATGCTGGATATGAGGAGGATGTTTCT
TCATACTGTTTCTATGCTAGAAGAAACTACCGGAAAGGGGAACAGGTTCTGGTAAGCTAC
GGTACCTACACAAATTTGGAGCTTCTTCAACATTATGGATTTCTTCTGACCGACAACCCA
AATGACAAGGCTTTTATACCTTTAGAATCAGATATGTATTCTCTCTGTTCATGGGAGAAT
GAGTTACTCTATGTTCAGCCAGATGGGAAACCATCCTTTGCGCTACTATCAACAGTGCGA
TTCTGGGCAGTCCCACAAAACAAGCGTAGGTCTTTTATACACCTTGTTTATTCAGGAAAC
CGACTTTCAGCACATAATGAAGTTGCTGCAATGAGATGGCTGGCAAAGAAATGCAGAACA
ACATTGTACATACTTCCAACTACTGCTGAAGAAGACGGTAAGTTACTCGTCATCCTTGAT
AAATTTCAGGATATCCATCAATTCGTGGAGATTAAAGAGATGCCACCACCACTTGCTAGT
GAGCTTTGTGCTTTCATGGAAAGCAAGGATATGCTTAGTGAAGGCATTTATGTCCCGTCA
AGTGTAGCTAGAAGGTCAATAGAGAGATGGAAATTAGCAATTCAATGGAGACTTCACTAC
AAAAAAATACTTTGCAATTGCATTGCTCATTGTACCGAGATTATTAATTATATTAATTCT
TCAAAAGATTCAGAATACCAGGAAATCTTCGTTAAGCCTGTGTATTTAAATCGATTCCTT
ATTATTATTATTATTAGTATTATTATTATTATTTGA

Peptide Sequence

PEP ID

XP_016511129.1
PEP Infomation

PREDICTED: protein SET DOMAIN GROUP 40-like [Nicotiana tabacum]
Sequence

MEEALNFLQWAADLGISDTPLTSTPQSDSCLGHSLFVSTFPDAGGRGLATARDIRKGELI
LKVPNGALMTSQNLMINDEVLSISVKKHPYLSSTQILVVALLNEVNKGKSSPWWPYLKQF
PRSYDTLADFDKFEIQALQIDDAIWAAQKASLKAEAEWKEASVLMHDLKLKPQLLTLKAW
LWASGSISSRTMHIPWDEAGCLCPVGDFFNYAAPGDETSNSEDQVAGKAFYLQEDSMLKS
ATELATDHRLIDAGYEEDVSSYCFYARRNYRKGEQVLVSYGTYTNLELLQHYGFLLTDNP
NDKAFIPLESDMYSLCSWENELLYVQPDGKPSFALLSTVRFWAVPQNKRRSFIHLVYSGN
RLSAHNEVAAMRWLAKKCRTTLYILPTTAEEDGKLLVILDKFQDIHQFVEIKEMPPPLAS
ELCAFMESKDMLSEGIYVPSSVARRSIERWKLAIQWRLHYKKILCNCIAHCTEIINYINS
SKDSEYQEIFVKPVYLNRFLIIIIISIIIII

Transcript Sequence

Gene sequence data has not been registered.